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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8490277_8491414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8490277 - 8491414

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CAATCTTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CATTTTCTAATT

Flanking Amino Acid:

VVQPKAMKIEKSFDAHPRRE

Intron Amino Acid Position:

1072

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.7

84.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.8

0.56

0.9

69.5

36.1

Minor 5ss

33.5

-1.9

47.2

Minor BPS

57.2

0.3

1.6

72.85

38.7

Associated Gene:

Gene:

SPAG9

Ensembl Gene ID:

ENSAPLG00000015555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030775

8438784 - 8498453

59670

ENSAPLT00000027468

8466084 - 8498453

32370

ENSAPLT00000025430

8438784 - 8498453

59670

ENSAPLT00000016312

8438784 - 8498453

59670

ENSAPLT00000040472

8438784 - 8498453

59670