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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8494453_8495318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8494453 - 8495318

Intron Length:

866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TCTTCTTTTACA

Flanking Amino Acid:

LHQGRLLGLRANKAAAGSGN

Intron Amino Acid Position:

1104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

91.8

0.94

0.6

87.1

23.5

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

71.5

0.67

1.6

78.96

37.6

Associated Gene:

Gene:

SPAG9

Ensembl Gene ID:

ENSAPLG00000015555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040472

8438784 - 8498453

59670

ENSAPLT00000030775

8438784 - 8498453

59670