Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_8608938_8609599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8608938 - 8609599

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGTTCTTTAAAA

Flanking Amino Acid:

RKLPNTLVRKDKDVARLQDF

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

69.4

0.44

1.1

71.8

37.2

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

76.8

0.84

1.3

81.56

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016183

8606173 - 8609743

3571