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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8639633_8640507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8639633 - 8640507

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

GTTTGTTTTACA

Flanking Amino Acid:

SKREIRKMLGVEDDELPELK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

80.4

34.2

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.81

0.8

79.9

37.7

Minor 5ss

37.2

-1.5

3.1

49.8

46.4

Minor BPS

55.3

0.16

2.1

71.79

40.2

Associated Gene:

Gene:

ANKRD40

Ensembl Gene ID:

ENSAPLG00000015126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045803

8636843 - 8643466

6624

ENSAPLT00000015769

8636843 - 8644969

8127