Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_8656915_8657870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8656915 - 8657870

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACAGTAC

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

TCAGCAGAAACT

Flanking Amino Acid:

DEGIEEDELTMVEEEEVLLA

Intron Amino Acid Position:

869

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.1

57.3

36.7

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

-1.5

3.6

48.6

42.5

Minor BPS

41.3

-0.5

2.4

61.33

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017936

8646908 - 8695286

48379

ENSAPLT00000014397

8646908 - 8694759

47852