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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8662231_8663246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8662231 - 8663246

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTTGTCATGC

Flanking Amino Acid:

NCVETKVIAPGYTICVKNAT

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

82.8

0.74

0.9

35.5

Minor 5ss

-2.2

3.2

45.7

Minor BPS

-0.6

2.5

61.59

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017936

8646908 - 8695286

48379

ENSAPLT00000014397

8646908 - 8694759

47852