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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8663889_8665110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8663889 - 8665110

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

TCGCAGTAAACT

Flanking Amino Acid:

TFAWISAPFLVALTTFAVYV

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

34.8

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

80.5

0.69

0.9

76.9

37.4

Minor 5ss

39.7

-1.2

2.8

46.7

43.9

Minor BPS

42.9

-0.4

2.4

61.87

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017936

8646908 - 8695286

48379

ENSAPLT00000014397

8646908 - 8694759

47852