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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8729054_8737179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8729054 - 8737179

Intron Length:

8126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

CCTCCCGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

CTCTCCTCCTCC

Flanking Amino Acid:

RLRRLEKKRRKAQCKPYYSD

Intron Amino Acid Position:

1404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.3

42.8

Major BPS

58.2

0.2

49.5

35.1

Major PPT

72.1

0.5

0.9

64.9

30.6

Minor 5ss

32.9

-2

3.1

36.1

41.8

Minor BPS

37.5

-0.9

3.6

57.93

46.9

Associated Gene:

Gene:

CACNA1G

Ensembl Gene ID:

ENSAPLG00000015833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016557

8718165 - 8799975

81811