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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8734692_8737179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8734692 - 8737179

Intron Length:

2488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

TTCGTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

GGATGATTAATG

Flanking Amino Acid:

RLRRLEKKRRNLMLDDVLME

Intron Amino Acid Position:

1496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.3

42.8

Major BPS

0.6

1.2

75.9

36.3

Major PPT

82.5

0.73

0.7

81.2

30.9

Minor 5ss

32.9

-2

3.1

36.1

41.8

Minor BPS

46.8

-0.3

51.22

42.8

Associated Gene:

Gene:

CACNA1G

Ensembl Gene ID:

ENSAPLG00000015833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016521

8706214 - 8802324

96111