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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8748592_8749464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8748592 - 8749464

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCCGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATAGTCCTAATT

Flanking Amino Acid:

VIFLTEMTVKVVALGLCFGE

Intron Amino Acid Position:

1256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

62.6

0.28

1.1

58.3

43.1

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

53.7

0.19

1.7

71.43

39.7

Associated Gene:

Gene:

CACNA1G

Ensembl Gene ID:

ENSAPLG00000015833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016558

8706214 - 8802324

96111

ENSAPLT00000016557

8718165 - 8799975

81811

ENSAPLT00000016522

8737007 - 8802324

65318

ENSAPLT00000016521

8706214 - 8802324

96111