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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8749534_8752573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8749534 - 8752573

Intron Length:

3040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTTTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

ERPKIEPHSAERIFLTLSNY

Intron Amino Acid Position:

1233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

68.2

39.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

41.3

-1

59.1

45.3

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

CACNA1G

Ensembl Gene ID:

ENSAPLG00000015833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016557

8718165 - 8799975

81811

ENSAPLT00000016522

8737007 - 8802324

65318

ENSAPLT00000016521

8706214 - 8802324

96111

ENSAPLT00000016558

8706214 - 8802324

96111