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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8753890_8759818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8753890 - 8759818

Intron Length:

5929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCTCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TCTGCTGTAAAT

Flanking Amino Acid:

CDDGDDEGNMSKRDRVKAWI

Intron Amino Acid Position:

1158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

78.9

0.65

0.7

74.5

29.9

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

49.4

0.04

2.2

72.3

Associated Gene:

Gene:

CACNA1G

Ensembl Gene ID:

ENSAPLG00000015833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016558

8706214 - 8802324

96111

ENSAPLT00000016522

8737007 - 8802324

65318

ENSAPLT00000016521

8706214 - 8802324

96111