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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8761300_8767876_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8761300 - 8767876

Intron Length:
6577

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATGTCC

5'SS Class:
major

3'SS Sequence:
CTCCCTGCTGAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTGCAG

U12 Branch Point Sequence:
TCCCTGCTGAAG

Flanking Amino Acid:
AILVEGFQTELSALLQGDAS

Intron Amino Acid Position:
910

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
69.4
36

Major BPS
37.4
-0.7
1.7
42.8
49.4

Major PPT
63.1
0.3
1
63.1
31.9

Minor 5ss
38.1
-1.3
3.2
51.4
45.3

Minor BPS
35.5
-1.2
2.2
36.92
39.2

Associated Gene:

Gene:
CACNA1G

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8706214 - 8802324
96111

8737007 - 8802324
65318

8706214 - 8802324
96111