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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8875254_8877107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8875254 - 8877107

Intron Length:

1854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTCTCTCAGCA

Flanking Amino Acid:

GTYQEKLYIEGEKEHFASVE

Intron Amino Acid Position:

866

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.6

40.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

77.7

0.62

0.8

74.2

29.3

Minor 5ss

34.1

-1.8

41.6

Minor BPS

50.3

0.01

1.8

64.77

41.6

Associated Gene:

Gene:

MYCBPAP

Ensembl Gene ID:

ENSAPLG00000003268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018157

8875131 - 8888051

12921