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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8880175_8880353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8880175 - 8880353

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTATCAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TGCTATTTACCT

Flanking Amino Acid:

EELFHRKNPKLHYQNRVVKQ

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

63.1

0.29

1.1

36.2

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

55.3

0.24

1.8

73.23

43.7

Associated Gene:

Gene:

MYCBPAP

Ensembl Gene ID:

ENSAPLG00000003268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018157

8875131 - 8888051

12921

ENSAPLT00000003354

8876077 - 8888051

11975

ENSAPLT00000043173

8876324 - 8888051

11728