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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8881257_8881777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8881257 - 8881777

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTCTCTCTAATT

Flanking Amino Acid:

MQCFYFDARPGVILPGETRK

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

31.2

Major BPS

82.2

0.8

0.9

81.6

Major PPT

81.3

0.7

0.8

78.2

33.8

Minor 5ss

35.8

-1.6

3.3

46.4

48.9

Minor BPS

68.1

0.65

1.6

84.17

37.2

Associated Gene:

Gene:

MYCBPAP

Ensembl Gene ID:

ENSAPLG00000003268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003354

8876077 - 8888051

11975

ENSAPLT00000043173

8876324 - 8888051

11728

ENSAPLT00000018157

8875131 - 8888051

12921