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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8882406_8883036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8882406 - 8883036

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TCCACAGAAACA

Flanking Amino Acid:

CSTSSEDSETLDSLGDYYDL

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

92.8

0.96

0.6

88.9

20.3

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

40.5

-0.7

2.4

52.58

45.4

Associated Gene:

Gene:

MYCBPAP

Ensembl Gene ID:

ENSAPLG00000003268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043173

8876324 - 8888051

11728

ENSAPLT00000018157

8875131 - 8888051

12921

ENSAPLT00000003354

8876077 - 8888051

11975