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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8883138_8883817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8883138 - 8883817

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TTCTCTGTATAT

Flanking Amino Acid:

VLEELDFYKPDLDGLEVIGK

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.5

Major BPS

64.1

0.35

1.2

45.5

Major PPT

0.56

66.5

43.4

Minor 5ss

-1.6

3.2

49.3

46.4

Minor BPS

47.6

-0.1

2.3

72.46

44.8

Associated Gene:

Gene:

MYCBPAP

Ensembl Gene ID:

ENSAPLG00000003268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043173

8876324 - 8888051

11728

ENSAPLT00000018157

8875131 - 8888051

12921

ENSAPLT00000003354

8876077 - 8888051

11975