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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8887263_8887966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8887263 - 8887966

Intron Length:

704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

GGAGACTGAAGG

Flanking Amino Acid:

RKEPRAGTPTDKKEKACEQS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

57.8

41.5

Major BPS

56.6

0.16

1.2

49.3

Major PPT

82.7

0.74

0.9

80.2

37.3

Minor 5ss

-2.5

3.6

29.8

43.2

Minor BPS

40.9

-0.8

1.9

39.99

42.9

Associated Gene:

Gene:

MYCBPAP

Ensembl Gene ID:

ENSAPLG00000003268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043173

8876324 - 8888051

11728

ENSAPLT00000018157

8875131 - 8888051

12921

ENSAPLT00000003354

8876077 - 8888051

11975