Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_8893523_8893740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8893523 - 8893740

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAG

U12 Branch Point Sequence:

GGTTGTGTAGCT

Flanking Amino Acid:

EDIKAFCKGKISHFKIPRHV

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

-0.4

1.8

43.1

49.2

Major PPT

84.4

0.77

0.7

77.3

31.4

Minor 5ss

35.6

-1.6

50.5

45.8

Minor BPS

43.1

-0.4

2.4

65.04

45.5

Associated Gene:

Gene:

ACSF2

Ensembl Gene ID:

ENSAPLG00000003799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003910

8893318 - 8931525

38208