Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_8937654_8938259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8937654 - 8938259

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

CATTCTTGATCT

Flanking Amino Acid:

KTKKETVQTRKPASSSRPPQ

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

83.8

0.84

73.6

41.8

Major PPT

0.72

0.9

75.8

38.2

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

56.5

0.28

1.8

73.84

Associated Gene:

Gene:

LRRC59

Ensembl Gene ID:

ENSAPLG00000004364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004533

8934294 - 8938504

4211

ENSAPLT00000020039

8934439 - 8938504

4066