Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_8941756_8942486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8941756 - 8942486

Intron Length:

731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CCATTGTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATCCATT

Flanking Amino Acid:

FSKAVAEAPYKRQQENTGFS

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

82.1

24.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

71.1

0.48

0.9

65.5

35.9

Minor 5ss

31.3

-2.1

2.7

33.5

35.5

Minor BPS

47.5

-0.1

2.2

75.15

41.5

Associated Gene:

Gene:

EME1

Ensembl Gene ID:

ENSAPLG00000022015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001348

8941092 - 8945432

4341

ENSAPLT00000044703

8941092 - 8945432

4341

ENSAPLT00000029313

8941092 - 8945432

4341

ENSAPLT00000023337

8941092 - 8945432

4341