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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8947777_8948211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8947777 - 8948211

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GGTCCTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAA

U12 Branch Point Sequence:

TCCCTCCCAACG

Flanking Amino Acid:

RLIRWHPGAYVGMGRNKTLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

74.4

36.1

Major BPS

50.7

0.02

1.2

62.1

35.8

Major PPT

79.2

0.66

0.9

72.7

37.5

Minor 5ss

36.9

-1.5

49.2

40.2

Minor BPS

44.8

-0.5

1.9

49.26

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004722

8943951 - 8948418

4468