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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8958244_8958681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8958244 - 8958681

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCGTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

GGTGTCCCACCG

Flanking Amino Acid:

GQANRLQNLEVGTEWDPKER

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

76.2

0.59

0.8

69.4

31.3

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

-1

41.4

42.9

Associated Gene:

Gene:

XYLT2

Ensembl Gene ID:

ENSAPLG00000004697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030369

8956986 - 8966403

9418

ENSAPLT00000004897

8956986 - 8966403

9418