Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_8961059_8961512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8961059 - 8961512

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCGCC

5'SS Class:

major

3'SS Sequence:

ATTTGCATCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

GCTTCCTAATTT

Flanking Amino Acid:

INLSATDYPTRTNEELVMFL

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

62.1

38.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

73.7

0.53

0.9

38.5

Minor 5ss

30.8

-2.2

3.5

41.3

45.5

Minor BPS

54.1

0.21

72.14

45.2

Associated Gene:

Gene:

XYLT2

Ensembl Gene ID:

ENSAPLG00000004697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030369

8956986 - 8966403

9418

ENSAPLT00000004897

8956986 - 8966403

9418