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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8961716_8962590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8961716 - 8962590

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGACCGTGAGCT

Flanking Amino Acid:

QHFFYIHVDKRSNYLHREAV

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.8

39.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

76.3

0.59

0.8

70.2

30.7

Minor 5ss

26.5

-2.7

3.2

34.9

41.5

Minor BPS

44.1

-0.3

2.3

64.66

44.8

Associated Gene:

Gene:

XYLT2

Ensembl Gene ID:

ENSAPLG00000004697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030369

8956986 - 8966403

9418

ENSAPLT00000004897

8956986 - 8966403

9418