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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8962767_8963214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8962767 - 8963214

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CGTTCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTGAAT

U12 Branch Point Sequence:

AATGACTGACTG

Flanking Amino Acid:

LSVPRHCQLSGKVSPVIQWD

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

50.6

0.02

1.5

61.4

43.2

Major PPT

74.8

0.56

0.8

65.5

36.1

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

41.9

-0.7

1.9

44.79

41.3

Associated Gene:

Gene:

XYLT2

Ensembl Gene ID:

ENSAPLG00000004697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030369

8956986 - 8966403

9418

ENSAPLT00000004897

8956986 - 8966403

9418