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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8984998_8987013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8984998 - 8987013

Intron Length:

2016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

TAATTCTTCACT

Flanking Amino Acid:

VQKLKGFKASRSHNNKLQST

Intron Amino Acid Position:

2814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

77.5

0.68

79.6

Major PPT

79.2

0.66

0.9

73.3

36.9

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

66.7

0.61

1.7

81.69

39.6

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000024221

8984961 - 9028428

43468

ENSAPLT00000006070

8984961 - 9040454

55494