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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8987201_8988733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8987201 - 8988733

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTCTTTAAAG

Flanking Amino Acid:

DYYGVIKEPMDLATMEERIL

Intron Amino Acid Position:

2752

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.5

0.48

1.1

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

72.5

0.57

1.4

73.53

38.6

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023968

8985744 - 9040837

55094

ENSAPLT00000046597

8985744 - 9040837

55094

ENSAPLT00000006070

8984961 - 9040454

55494

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000027869

8985744 - 9040837

55094

ENSAPLT00000024221

8984961 - 9028428

43468