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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8988819_8989740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8988819 - 8989740

Intron Length:

922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTTTTGTAATT

Flanking Amino Acid:

GLRRVLRSLQAHKMAWPFLE

Intron Amino Acid Position:

2724

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

80.3

26.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.1

0.61

37.5

Minor 5ss

28.6

-2.5

3.4

37.8

Minor BPS

58.1

0.33

78.3

39.3

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023968

8985744 - 9040837

55094

ENSAPLT00000046597

8985744 - 9040837

55094

ENSAPLT00000006070

8984961 - 9040454

55494

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000027869

8985744 - 9040837

55094

ENSAPLT00000024221

8984961 - 9028428

43468