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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8994619_8995038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8994619 - 8995038

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TAATATACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATCCATTTAATA

Flanking Amino Acid:

LDKELQIEVQEELKRDLTKI

Intron Amino Acid Position:

2485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

71.9

0.49

67.8

42.7

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

57.2

0.22

1.5

63.94

36.5

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024221

8984961 - 9028428

43468

ENSAPLT00000023968

8985744 - 9040837

55094

ENSAPLT00000046597

8985744 - 9040837

55094

ENSAPLT00000006070

8984961 - 9040454

55494

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000027869

8985744 - 9040837

55094