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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8995265_8996914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8995265 - 8996914

Intron Length:

1650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAATATG

5'SS Class:

strong_major

3'SS Sequence:

CGTTCATCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

CTTTCGTTCATC

Flanking Amino Acid:

LTPAEREENQRMIVCNQVMK

Intron Amino Acid Position:

2409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

80.2

34.3

Major BPS

72.4

0.56

1.2

39.9

Major PPT

0.4

59.8

40.7

Minor 5ss

33.3

-1.9

2.9

41.5

45.1

Minor BPS

-0

2.4

69.44

42.9

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023968

8985744 - 9040837

55094

ENSAPLT00000046597

8985744 - 9040837

55094

ENSAPLT00000006070

8984961 - 9040454

55494

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000027869

8985744 - 9040837

55094

ENSAPLT00000024221

8984961 - 9028428

43468