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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9001907_9002839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9001907 - 9002839

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTACTTTATTT

Flanking Amino Acid:

VAVNVPSTQGGVVQVQQKVL

Intron Amino Acid Position:

1852

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

37.4

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

78.2

0.63

0.9

78.1

35.2

Minor 5ss

27.1

-2.6

3.7

36.6

47.9

Minor BPS

67.5

0.63

1.6

84.37

36.8

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024221

8984961 - 9028428

43468

ENSAPLT00000006070

8984961 - 9040454

55494

ENSAPLT00000046597

8985744 - 9040837

55094

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000027869

8985744 - 9040837

55094