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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9001907_9003423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9001907 - 9003423

Intron Length:

1517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTACTTTATTT

Flanking Amino Acid:

TWVKQGQSSTGVVQVQQKVL

Intron Amino Acid Position:

2205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

78.2

0.63

0.9

78.1

35.2

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

67.5

0.63

1.6

84.37

36.8

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023968

8985744 - 9040837

55094