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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9003002_9003423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9003002 - 9003423

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTACCTCAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TGTACCTCAATA

Flanking Amino Acid:

TWVKQGQSSTATSTAATSAT

Intron Amino Acid Position:

1798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

0.57

73.6

28.6

Major PPT

64.6

0.33

0.9

59.4

36.8

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

65.2

0.47

1.6

73.65

37.9

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027869

8985744 - 9040837

55094

ENSAPLT00000024221

8984961 - 9028428

43468

ENSAPLT00000006070

8984961 - 9040454

55494

ENSAPLT00000046597

8985744 - 9040837

55094

ENSAPLT00000036325

8984961 - 9040837

55877