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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9003677_9005084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9003677 - 9005084

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTAAATTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTTCTAAATT

Flanking Amino Acid:

KAQAVELQAKKRLEQQKQIP

Intron Amino Acid Position:

1714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

78.8

30.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

68.7

0.42

0.9

62.5

39.1

Minor 5ss

28.4

-2.5

2.9

32.1

42.4

Minor BPS

74.8

0.86

1.6

91.07

32.9

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000024221

8984961 - 9028428

43468

ENSAPLT00000006070

8984961 - 9040454

55494