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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9012046_9012802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9012046 - 9012802

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

AAATGTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAATGTTTAACA

Flanking Amino Acid:

VKYTFPVKHQVWKQKGEEYR

Intron Amino Acid Position:

658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.1

0.34

1.1

58.9

45.2

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

60.9

0.34

1.7

67.8

38.4

Associated Gene:

Gene:

BPTF

Ensembl Gene ID:

ENSAPLG00000005839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023968

8985744 - 9040837

55094

ENSAPLT00000046597

8985744 - 9040837

55094

ENSAPLT00000006070

8984961 - 9040454

55494

ENSAPLT00000036325

8984961 - 9040837

55877

ENSAPLT00000027869

8985744 - 9040837

55094

ENSAPLT00000024221

8984961 - 9028428

43468