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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9153488_9153902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9153488 - 9153902

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTAATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TAATCTTTAATT

Flanking Amino Acid:

EAASILQELQVETYGSMEKK

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

73.2

39.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.7

0.69

0.8

78.9

33.2

Minor 5ss

46.1

-0.4

2.6

62.1

42.6

Minor BPS

79.7

1.01

86.02

33.7

Associated Gene:

Gene:

PSMD12

Ensembl Gene ID:

ENSAPLG00000007388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007702

9149799 - 9157529

7731