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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9179192_9180978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9179192 - 9180978

Intron Length:

1787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TTTTACCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTTAAACT

Flanking Amino Acid:

LYRIASFLQLKKYGQADEDC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

38.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.4

0.86

0.7

85.7

28.6

Minor 5ss

33.4

-1.9

3.4

46.1

43.6

Minor BPS

68.5

0.66

1.6

84.25

36.7

Associated Gene:

Gene:

HELZ

Ensembl Gene ID:

ENSAPLG00000007762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034062

9178964 - 9237477

58514

ENSAPLT00000008118

9178964 - 9244830

65867