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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9193489_9195281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9193489 - 9195281

Intron Length:

1793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCATATCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCATAT

U12 Branch Point Sequence:

GTCTCCATATCC

Flanking Amino Acid:

RVMIDAASTEDLEYLMHARQ

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

61.6

0.29

1.1

57.2

40.1

Major PPT

74.8

0.56

0.9

66.3

38.8

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

54.9

0.13

1.9

68.19

Associated Gene:

Gene:

HELZ

Ensembl Gene ID:

ENSAPLG00000007762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034062

9178964 - 9237477

58514

ENSAPLT00000033006

9162549 - 9244830

82282

ENSAPLT00000008118

9178964 - 9244830

65867