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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9214689_9216271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9214689 - 9216271

Intron Length:

1583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTCATTTATTT

Flanking Amino Acid:

QYLCQLDLEPGFFTHILLDE

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

75.7

29.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

82.4

0.73

0.9

37.4

Minor 5ss

43.3

-0.7

2.8

55.5

48.7

Minor BPS

56.8

0.29

1.7

78.23

38.3

Associated Gene:

Gene:

HELZ

Ensembl Gene ID:

ENSAPLG00000007762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034062

9178964 - 9237477

58514

ENSAPLT00000033006

9162549 - 9244830

82282

ENSAPLT00000008118

9178964 - 9244830

65867