Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_9344112_9344289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9344112 - 9344289

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

CCTCTCCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GGGCCCTGACCT

Flanking Amino Acid:

LTSESTVNVLKMIRSATPFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.1

35.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.5

0.46

0.9

62.9

33.1

Minor 5ss

35.6

-1.6

3.3

45.6

43.6

Minor BPS

48.9

-0

1.8

64.33

45.1

Associated Gene:

Gene:

CACNG5

Ensembl Gene ID:

ENSAPLG00000009163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009540

9342764 - 9345248

2485