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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9352110_9379737_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9352110 - 9379737

Intron Length:

27628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAAGAG

5'SS Class:

major

3'SS Sequence:

CACTGCCATTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

CTTAATTTAGCT

Flanking Amino Acid:

PAKRLGCGLEGEKKETGVLA

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

64.5

35.4

Major BPS

69.2

0.48

1.3

71.9

Major PPT

55.3

0.12

1.1

57.1

37.8

Minor 5ss

23.7

-3

3.1

28.4

43.8

Minor BPS

53.1

0.18

1.8

73.56

43.3

Associated Gene:

Gene:

PRKCA

Ensembl Gene ID:

ENSAPLG00000009329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009837

9351009 - 9524846

173838