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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9392483_9395285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9392483 - 9395285

Intron Length:

2803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTACGTGAG

5'SS Class:

major

3'SS Sequence:

TACTTTATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GCATCTTTAATA

Flanking Amino Acid:

TQLHSCFQTVDRLYFVMEYV

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.1

58.2

40.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

73.4

0.53

0.9

66.5

39.1

Minor 5ss

33.5

-1.9

3.4

45.2

44.3

Minor BPS

70.1

0.63

1.2

68.59

38.2

Associated Gene:

Gene:

PRKCA

Ensembl Gene ID:

ENSAPLG00000009329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023898

9378577 - 9524846

146270

ENSAPLT00000009837

9351009 - 9524846

173838

ENSAPLT00000032439

9378577 - 9524846

146270