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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9396063_9400870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9396063 - 9400870

Intron Length:

4808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTCCA

5'SS Class:

strong_major

3'SS Sequence:

ATATGTTCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTGTGTGTATAT

Flanking Amino Acid:

FEGKRTGRDKKAKLGPAGNK

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.8

39.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

77.7

0.62

0.9

74.3

40.6

Minor 5ss

-2.5

2.9

33.4

41.7

Minor BPS

41.1

-0.6

2.5

64.24

46.5

Associated Gene:

Gene:

PRKCA

Ensembl Gene ID:

ENSAPLG00000009329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023898

9378577 - 9524846

146270

ENSAPLT00000009837

9351009 - 9524846

173838