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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9400895_9415075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9400895 - 9415075

Intron Length:

14181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAGAT

U12 Branch Point Sequence:

TTGGGCTGAATA

Flanking Amino Acid:

GNAELRQKFEGKRTGRDKKA

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

87.7

Major BPS

62.6

0.31

58.7

38.1

Major PPT

72.7

0.51

68.3

42.2

Minor 5ss

32.8

-2

3.3

47.8

47.9

Minor BPS

49.3

-0

63.64

43.3

Associated Gene:

Gene:

PRKCA

Ensembl Gene ID:

ENSAPLG00000009329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023898

9378577 - 9524846

146270

ENSAPLT00000009837

9351009 - 9524846

173838