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Intron Name: Anas_platyrhynchos_platyrhynchos_19_940538_943767_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

940538 - 943767

Intron Length:

3230

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCG|GCTTGTGAT

5'SS Class:

major

3'SS Sequence:

GACCGAAAAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TCCCATATAAAG

Flanking Amino Acid:

YSYEYLGNTPRLSSPSCWGD

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.5

62.1

47.1

Major BPS

69.8

0.49

70.3

31.8

Major PPT

39.7

-0.6

1.6

30.2

34.1

Minor 5ss

-2.6

41.8

44.9

Minor BPS

42.1

-0.7

1.8

43.83

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029885

938547 - 943864

5318