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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9416274_9427372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9416274 - 9427372

Intron Length:

11099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTATATTGACA

Flanking Amino Acid:

EVTADKLEVTVREAKNLIPM

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.6

35.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

76.9

0.61

73.1

41.1

Minor 5ss

35.4

-1.7

2.8

45.8

42.3

Minor BPS

62.1

0.38

1.6

76.14

34.2

Associated Gene:

Gene:

PRKCA

Ensembl Gene ID:

ENSAPLG00000009329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023898

9378577 - 9524846

146270

ENSAPLT00000009837

9351009 - 9524846

173838

ENSAPLT00000032439

9378577 - 9524846

146270