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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9538137_9538737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9538137 - 9538737

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

TTTTTGGTAAAG

Flanking Amino Acid:

ALTHSALAAKVCSKPPEVLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

74.6

37.4

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

84.4

0.77

0.7

76.4

32.2

Minor 5ss

37.6

-1.4

3.3

50.9

45.8

Minor BPS

45.4

-0.4

2.6

63.72

44.3

Associated Gene:

Gene:

APOH

Ensembl Gene ID:

ENSAPLG00000010266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039662

9538073 - 9543440

5368

ENSAPLT00000033773

9538073 - 9543440

5368

ENSAPLT00000010709

9538073 - 9544183

6111