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Intron Name: Anas_platyrhynchos_platyrhynchos_19_9538915_9539626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9538915 - 9539626

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

CTTTAATTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCTTTAATT

Flanking Amino Acid:

KWPLNTLLCLPMRCPTPGQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.3

74.1

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.3

0.57

70.1

Minor 5ss

-1.6

2.7

37.8

40.1

Minor BPS

84.8

1.17

0.9

92.65

29.3

Associated Gene:

Gene:

APOH

Ensembl Gene ID:

ENSAPLG00000010266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033773

9538073 - 9543440

5368

ENSAPLT00000010709

9538073 - 9544183

6111